BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B02SP1|AL427112
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1455 0.0
3x_Contig356 119 9e-27
>3x_Contig1752
Length = 22471
Score = 1455 bits (721), Expect = 0.0
Identities = 839/877 (95%), Gaps = 12/877 (1%)
Strand = Plus / Plus
Query: 1 aatgctcaaaagctacaccgttcaactttgcgagcyctgatttatgtcgagtatcaagtt 60
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15388 aatgctcaaaagcaacaccgttcaactttgcgagctctgatttatgtcgagtatcaagtt 15447
Query: 61 cctgttctaagtctgtacatttggcatttacttgcttcctcgtcttctttgatgcttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15448 cctgttctaagtctgtacatttggcatttacttgcttcctcgtcttctttgatgcttgct 15507
Query: 121 tcttcaaagaagtaatctgattggtcaaatctttacgttccttgcgatgacgcgcaa-sa 179
||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
Sbjct: 15508 tcttcaaagaagtaatctgattgttc-aatctttacgttccttgcgatgacgcgcaagca 15566
Query: 180 gctcctcttgtgcagtttcagtagacattcacttattcttgatgagattgcttcagagag 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 15567 gctcctcttgtgcagtttcagtagacattcacttattcttga-gagattgcttcagagag 15625
Query: 240 gagttcctttatataacaataaaamtygttagtatgctgaagatgagatgagcctattca 299
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 15626 gagttcctttatataacaataaaaattgttagtatgctgaagatgagatgagcctattca 15685
Query: 300 tctctacttcttcattttcaggtttttttggttttcatgtttcgcagaccagaaagagag 359
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15686 tctc-acttcttcattttcaggtttttttggttttca-gtttcgcagaccagaaagagag 15743
Query: 360 atgacgwgcaggattagctacgaataamamamaaatcaaaaaatagcgccgctcggtttc 419
|||||| |||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 15744 atgacg-gcaggattagctacgaataaaaaaaaaatcaaaaaatagcgccgctcggtttc 15802
Query: 420 gatccgaggacatcagggttwtgagccctgcgcgcttccactgcgccatcggcgctgtca 479
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 15803 gatccgaggacatcagggttatgagccctgcgcgcttccactgcgcca-cggcgctgtca 15861
Query: 480 aagcatgaagttttagtttttccaacgaccagatcwcatctgcgacaactccaggcagct 539
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15862 aag-atgaagttttagtttttccaacgaccagatcacatctgcgacaactccaggcagct 15920
Query: 540 ccggaatcattttcttcgtcccgtgcccccgctgttgawatgacttaccccacataaagt 599
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 15921 ccggaatcattttcttcgtcccgtgcccccgctgttgaaatgacttaccccacataaagt 15980
Query: 600 ttacaaaaaaaatgawaaatccgggagcgtgttagggtattaacgaywgaccctkaagga 659
|| |||||||||||| ||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 15981 tt-caaaaaaaatgaaaaatccgggagcgtgttagggaattaacgacagaccctgaagga 16039
Query: 660 aagtkagtwaacgcttcaaagagcggcttkaacatgttatattccggtcta-cccggaga 718
|||| ||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 16040 aagtgagtaaacgcttcaaagagcggcttgaacatgttatattccggtctaccccggaga 16099
Query: 719 aagatgtttcackcgctgaacaggagaaggtcattktatatattcctacttttttctktt 778
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 16100 aagatgtttcacgcgctgaacaggagaaggtcattgtatatattcctacttttttctgtt 16159
Query: 779 gcctctctactttctggtgctatttgwaagagttttttttgttttttcatctttccgccr 838
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 16160 gcctctctactttctggtgctatttgtaagagttttttttg-tttttcatctttccgccg 16218
Query: 839 gatttggttaattcccccggagattccatttctccgg 875
|| |||||||||| |||||||||||||||||||||||
Sbjct: 16219 ga-ttggttaatttccccggagattccatttctccgg 16254
>3x_Contig356
Length = 1664
Score = 119 bits (59), Expect = 9e-27
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 403 tagcgccgctcggtttcgatccgaggacatcagggttwtgagccctgcgcgcttccactg 462
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 960 tagcggcgctcggtttcgatccgaggacatcagggttatgagccctgcgcgcttccactg 901
Query: 463 cgcca 467
|||||
Sbjct: 900 cgcca 896
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6538
Number of Sequences: 1807
Number of extensions: 6538
Number of successful extensions: 225
Number of sequences better than 1.0e-20: 2
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)